Photosynthetica 2021, 59(2):303-312 | DOI: 10.32615/ps.2021.025
Screening of highly efficient photosynthetic hybrids of Oryza officinalis and analysis of their photosynthetic pathway genes
- 1 Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences, 650205 Kunming, China
- 2 Zhaotong University, 657000 Zhaotong, China
- 3 Technology Center of China Tobacco Yunnan Industrial Co., 650023 Kunming, China
Hereditary properties of strong growth and huge accumulation of biomass in Oryza officinalis exhibit a great potential; however, the genes that code for its high photosynthesis performance are not established. This study screened eight hybrids, using biomass accumulation and photosynthesis analysis, based on the introgression lines constructed by analyzing distant hybridization patterns between Oryza officinalis and cultivars HY-8. We designed 23 primer pairs using transcriptome sequencing of Oryza officinalis and screened two types of photosynthetic enzymes: phosphoenolpyruvate carboxylase (PEPC) and pyruvate orthophosphate dikinase (PPDK), which are two related proteins of ribulose-1,5-biphosphate carboxylase/oxygenase (Rubisco), its binding protein (rubis-subs-bind), and a small subunit (rbcS). Results showed that C4 photosynthetic pathway enzymes, PEPC and PPDK, were highly expressed in hybrids and the source plant, Oryza officinalis. Homology analysis also indicated that the sequences of those two genes were different from those of the C3 and C4 plants investigated. Therefore, a better understanding of the photosynthetic characteristics of Oryza officinalis would provide clues for further isolation of valuable genes from this plant.
Additional key words: excellent traits; gene homology; PCR amplification; photosynthetic parameters; primer design.
Received: September 19, 2020; Revised: March 5, 2021; Accepted: April 6, 2021; Prepublished online: May 17, 2021; Published: June 29, 2021 Show citation
| ACS | AIP | APA | ASA | Harvard | Chicago | Chicago Notes | IEEE | ISO690 | MLA | NLM | Turabian | Vancouver |
Supplementary files
| Download file | Li_2637_supplement.docx File size: 1.44 MB |
References
- Cheng G., Wang L., Lan H.Y.: Cloning of PEPC-1 from a C4 halophyte Suaeda aralocaspica without Kranz anatomy and its recombinant enzymatic activity in responses to abiotic stresses. - Enzyme Microb. Technol. 83: 57-67, 2016.
Go to original source... - Deng H., Zhang L.S., Zhang G.Q. et al.: Evolutionary history of PEPC genes in green plants: Implications for the evolution of CAM in orchids. - Mol. Phylogenet. Evol. 94: 559-564, 2016.
Go to original source... - Deng Q.Y., Yuan L.P., Liang F.S. et al.: [Studies on yield-enhancing genes from wild rice and their marker-assisted selection in hybrid rice.] - Hybrid Rice 19: 6-10, 2004. [In Chinese]
- Ding Z.S., Huang S.H., Zhou B.Y. et al.: Over-expression of phosphoenolpyruvate carboxylase cDNA from C4 millet (Seteria italica) increase rice photosynthesis and yield under upland condition but not in wetland fields. - Plant Biotechnol. Rep. 7: 155-163, 2013.
Go to original source... - Ding Z.S., Sun X.F., Huang S.H. et al.: Response of photosynthesis to short-term drought stress in rice seedlings overexpressing C4 phosphoenolpyruvate carboxylase from maize and millet. -Photosynthetica 53: 481-488, 2015.
Go to original source... - Ding Z.S., Zhou B.Y., Sun X.F. et al.: High light tolerance is enhanced by overexpressed PEPC in rice under drought stress. - Acta Agron. Sin. 38: 285-292, 2012.
Go to original source... - Duan M.J., Tang H.Y., Yuan D.Y. et al.: [On key functional photosynthetic factors and ways to breeding for high photosynthetic efficiency in rice.] - Hybrid Rice 23: 1-3, 2008. [In Chinese]
- El-Sharkawy M.A.: Prospects of photosynthetic research for increasing agricultural productivity, with emphasis on the tropical C4 Amaranthus and the cassava C3-C4 crops. - Photosynthetica 54: 161-184, 2016.
Go to original source... - Gu J.F., Qiu M., Yang J.C.: Enhanced tolerance to drought in transgenic rice plants overexpressing C4 photosynthesis enzymes. - Crop J. 1: 105-114, 2013.
Go to original source... - Hua L., Wang D.R., Tan L.B. et al.: LABA1, a domestication gene associated with long, barbed awns in wild rice. - Plant Cell 27: 1875-1888, 2015.
Go to original source... - Jiang X.S., Li H.Y., Wang T. et al.: Gibberellin indirectly promotes chloroplast biogenesis as a means to maintain the chloroplast population of expanded cells. - Plant J. 72: 768-780, 2012.
Go to original source... - Ke X., Yin F.Y., Xiao S.Q. et al.: [High photosynthetic efficiency of Oryza officinalis Wall. in Yunnan.] - China Rice 21: 72-76, 2015. [In Chinese]
- Kiran T.V., Rao Y.V., Subrahmanyam D. et al.: Variation in leaf photosynthetic characteristics in wild rice species. - Photosynthetica 51: 350-358, 2013.
Go to original source... - Li C.L., Wang Y.Q., Liu L.C. et al.: A rice plastidial nucleotide sugar epimerase is involved in galactolipid biosynthesis and improves photosynthetic efficiency. - PLoS Genet. 7: e1002196, 2011.
Go to original source... - Lin L., Zhong S.H., Cui X.F. et al.: Characterization of temperature-sensitive mutants reveals a role for receptor-like kinase SCRAMBLED/STRUBBELIG in coordinating cell proliferation and differentiation during Arabidopsis leaf development. - Plant J. 72: 707-720, 2012.
Go to original source... - Murchie E.H., Pinto M., Horton P.: Agriculture and the new challenges for photosynthesis research. - New Phytol. 181: 532-552, 2009.
Go to original source... - Sen P., Ghosh S., Sarkar S.N. et al.: Pyramiding of three C4 specific genes towards yield enhancement in rice. - Plant Cell Tiss. Org. 128: 145-160, 2017.
Go to original source... - Shen W.J., Chen G.X., Xu J.G. et al.: Overexpression of maize phosphoenolpyruvate carboxylase improves drought tolerance in rice by stabilization the function and structure of thylakoid membrane. - Photosynthetica 53: 436-446, 2015.
Go to original source... - Shen W.J., Ye L.H., Ma J. et al.: The existence of C4-bundle-sheath-like photosynthesis in the mid-vein of C3 rice. - Rice 9: 20, 2016.
Go to original source... - Sun R.H., Fan H.T., Gao F. et al.: Crystal structure of Arabidopsis Deg2 protein reveals an internal PDZ ligand locking the hexameric resting state. - J. Biol. Chem. 287: 37564-37569, 2012.
Go to original source... - Suzuki Y., Ohkubo M., Hatakeyama H. et al.: Increased Rubisco content in transgenic rice transformed with the 'sense' rbcS gene. - Plant Cell Physiol. 48: 626-637, 2007.
Go to original source... - von Caemmerer S., Quick W.P., Furbank R.T.: The development of C4 rice: current progress and future challenges. - Science 336: 1671-1672, 2012.
Go to original source... - Wang P., Vlad D., Langdale J.A.: Finding the genes to build C4 rice. - Curr. Opin. Plant Biol. 31: 44-50, 2016.
Go to original source... - Wang Z.M., Li H.X., Liu X.F. et al.: Reduction of pyruvate orthophosphate dikinase activity is associated with high temperature-induced chalkiness in rice grains. - Plant Physiol. Bioch. 89: 76-84, 2015.
Go to original source... - Wu J.T., Qi Y.W., Hu G.L. et al.: Genetic architecture of flag leaf length and width in rice (Oryza sativa L.) revealed by association mapping. - Genes Genom. 39: 341-352, 2017.
Go to original source... - Wu X.R., Tang D., Li M. et al.: Loose plant architecture 1, an INDETERMINATE DOMAIN protein involved in shoot gravitropism, regulates plant architecture in rice. - Plant Physiol. 161: 317-329, 2013.
Go to original source... - Xiang J.J., Zhang G.H., Qian Q. et al.: SEMI-ROLLED LEAF1 encodes a putative glycosylphosphatidylinositol-anchored protein and modulates rice leaf rolling by regulating the formation of bulliform cells. - Plant Physiol. 159: 1488-1500, 2012.
Go to original source... - Yang K.S., He H.H., Chen X.R.: [Excavation and utilization of beneficial genes in wild rice and research progress.] - Seed. 24: 92-95, 2005. [In Chinese]
- Yang Q.Y., Qiao J.F.: [The application of Li-6400 portable photosynthesis system in rice and analysis of common problems.] - Res. Explor. Lab. 28: 52-55, 2009. [In Chinese]
- Ye Z.P., Yu Q.: [Comparison of new and several classical models of photosynthesis in response to irradiance.] - Chin. J. Plant Ecol. 32: 1356-1361, 2008. [In Chinese]
- Zhang F., Chi W., Wang Q. et al.: Molecular cloning of C4-specific Ppc gene of sorghum and its high level expression in transgenic rice. - Chin. Sci. Bull. 48: 1835-1840, 2003.
Go to original source... - Zhang F.T., Xu T., Mao L.Y.: Genome-wide analysis of Dongxiang wild rice (Oryza rufipogon Griff.) to investigate lost/acquired genes during rice domestication. - BMC Plant Biol. 16: 103, 2016.
Go to original source... - Zhang Y.W., Zhao X.G., Guan ZH.B. et al.: [The review on screening crop germplasm resources with high photosynthetic efficiency.] - Chin. Agr. Sci. Bull. 35: 1-11, 2019. [In Chinese]




